Browse of TCMCG083C06273 protein

CDS

Accession Number	TCMCG083C06273
gbkey	CDS
Protein Id	KMZ62173.1
Location	join(8118..8257,9375..9698,9836..9922,13792..14053,16996..17235,25465..26799,27934..28186,28257..28377,28465..28552,28742..28820,29144..29439,33002..34082,34191..34562,34693..35336)
Organism	Zostera marina
locus_tag	ZOSMA_487G00010

Protein

Length	1773aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA41721, BioSample:SAMN00991190
db_source	LFYR01001404.1
Definition	Mediator of RNA polymerase II transcription subunit [Zostera marina]
Locus_tag	ZOSMA_487G00010

EGGNOG-MAPPER Annotation

COG_category	K
Description	Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko03021        [VIEW IN KEGG]
KEGG_ko	ko:K15164        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04919        [VIEW IN KEGG] map04919        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0005215        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008643        [VIEW IN EMBL-EBI] GO:0015144        [VIEW IN EMBL-EBI] GO:0016020        [VIEW IN EMBL-EBI] GO:0016021        [VIEW IN EMBL-EBI] GO:0022857        [VIEW IN EMBL-EBI] GO:0031224        [VIEW IN EMBL-EBI] GO:0034219        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0044425        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051119        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0055085        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0071702        [VIEW IN EMBL-EBI] GO:0090213        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCTCTATGCCACTTTTATTGATATGATTGATATTGACATTGATGATATTATTCTGACAGTTATTGTTGCATCTAATGGAATGCGAGGCAGACTTACTGGATGTTGTCCTACTGACCTTGTGAAACAAGTATATTCGACAAATTCATCAAATGGATCTACTGTTCTTGGTGTTTCTTCTCAATTTCCTGGTTGTCAGCTTAGAGGGCAAAGTTGCTATGTTGAAGTCACCTTGGGCTGCCTTTCTGGTAGTGCTGAAAAAACAGTGCAATCAACATCAAATCCTTATATGTGTATTACACAGTATTGTACAAAGTCAAATCCTGCAGTGACTGATGAAAGAAGAGCGAAAAAACCCAGGCTGTCTGAGACTTTTCCAATGCTTGAGAAAACATTGATTTTTCCAGTTGAGACAGTATTGGTTCCAATCTTTTACAAAGCCTGTGCCAAAGCTTCTTTAAAGAGAATATGGCTACGTGACTCTTCTGGAACATCTCTTTCTGTTATGCCATCATTGTGGAATTGTTCAGACTCAAATTTTATAAACTATTGTTTGGGTTTCGGAGGATCATGCGATATTAGTCTTGCTGACAGTGTTTTGGGAGAATTTATTGACTCGCATCGTCAGCGCAAATATAATAATAGAAATTGTAGTAACAGCAGTAGCATCAGTAGCACTAGCAGTACGTCAAACAATAGTGATGTTGCAAATACTTCTGTTGCTCGTGAACTTGAAGCTGATGCAGATTCACTTTCGTGTAGACAATCTGGTTTATCCTTAAATGATCAGCTTGAGAAAGATAACCACAAAAGGGCTTCCAAACGTTCATGGAAAGAAATAGCAGGATCTTTTGATCAAGCATGCAATGTTGCTAGTGGGAGTATCATTGACCCATATACATCAAACCGTAGTCTAGTTGGATTTCAATTTGATTCCATTTGGGATTGGGATCAAGGCAGATGCATTAATGTGGATATTGTAGATGTGGTTGCTGAATATGGTAGTTTTGACGATTTTTTCGAGGATGATAATTTTGATGTTATTCTTGGGGAGCTCCCTGGTACAGAAGAATCACAGACTGCCATGTTTTCAGCTACCAATGGAGGGGAAACCAGTAGCAGCCCTTGTTTAGGAAAGAACGATGGACCAGAACAAACACCTATCCCTTTCCCAAATTTGCCATTGATTGAGGAGCATATTCAAGACATCGGGCCAAGTAATAATGAGTTTATGAATCAAAATATGGAATCTACCATGGATACTGGACAATCATCTATTACTGGTGACAGTTCAATTACAAATAAATATGATTATCTGAAAAGAGCCGAAGCAATGATGACAGTAATTCCACGATATTCAGCAGTTGAAACACCCTTTAGTGAGTTCTCAATATCAATATTTAGAACTCCGTATGTCCCCAAATCAAAACTTGTTGAGAAACCTTCAGGTTTGTCTTCATATGTTCACAGTACAACCCATCCACAACTGATATCAGAAGAAAAGGTGGAAATGGCATCAAAAGCAAAGATGATCACTGGGGATTATGATACGATCTCTAGTTATTCCAAGTACTACAATTTTGTAAATGGTAGGAAAAATTACATCAAAAAAAAATCCATAACTAATGAAATGACCTTGCATGAAGATGATAATCTATCATCTCTTTCTGGCATTACTTTTCCTAGTTCATCAACATCTTTCCAAGAAAAGAAGACTGACGATACACTAGAAACAGGGTGCCTTTTAATGTCTCTGAAGACCGTTCTTGGTACTGAATTAGAATGCGGCATGTACCAGGCTTCAATGCGTAGAATCAGACACACACTTTTATTTTGCAACCAAGTTCCCAAGTCACTGGTTATGCGTACTAGCCAAGGATTATCCATTCAGGTAACAGGTGATCAAAGCATGATGCCAAACATGATATCTAGTGGAAACGGAATAAAGAAGAAAGATTCTATACCTGTTAGAATAGCTGGTGATATAGATTCTGTGCCTGATAATTCGGTGACTGCGCCACTTGGTGTTTGGCGTGTTGTTGCACCTTCGAAATCTACAAAAGCTTCCAACATGCTGAATGTTGAAAGCTCACCTTTTCCCAAAAATAATGCTGTTGAAGATTTTCCTGTTTTCAGCCGGAGACAACCTCTTCAGGAACTTCTGGATGCTATTTCTCTGTTAGTTCAACAGTCAACGTCTTTTGTTGACGTATCACTTGATCCATGTGATGGAGATGGATCTTACGACTTTCTTACATTAGAGGAACAGATTCGACGTGGGTTTGTTTGCGGTCCGTCATCTGTTCATGCAGGCTGTGGTGGTGTTTTGGCATCTTGCCATTCTGTGGACATTGCTGGTGTTGATTTAGTTAATCCACTTTCCACTGATGTCCGTGTATCATCAGTCATTAGCTTGCTACACTCTGAAGTAAGAGTCGCTATGAGAGCTGCTTTTGGAAATTTGGAAGGACCTTTATCTGTAATTGAGTGGTGCAACGGTCATAACCAATCTGGTGATACTATAAATACAGGTGATATCCATTATGCTGAATGCAATAACACTGAACTTAATGATTCCTCAAGTGAATTTATTGGAGAAGCAATCAGTCCAACTTTTGCCAGTAACATATCTTCTCTCAGAGATGGAGTTCGAATAGACGAGTCATCCCAAAGGCGGTCAAACCAAGAACAAGAACATAAAATAAGTGGTTTTCGTAACAGACCAACTATTTCAATGCTTCCTTTACCTTCACTACTTATTGGGTTCCAGGATGACTGGTTAAAAACATCACCAATCATCTTGAATTCTTGGGAAAAAGAGCAATTTGAGCCTTACGCTTTACCAAAACCTCTTACATACTGTGCTGTATGCCCAGATATTGATTTCTTAACTTTTGCCAGTGCCACTTTTCTTCGGCAAATTGGAATTGTTTATGAATCTTGTAATTTGGGAACTCATTCGCCGTATCTGATTGGATCTCAATTGGATATAGCTTCTAAAAAGTCAAGTATTCCTGGCTTGGTCCTCGTTGATTGTCCTCAAACAATGAAAAAAACAGGAATGGCATCTACATCAGAGAATGTTCTTAATGACTACCTTATTTCATCAAAAAAAAACTGGGATTTGAAAAGTTTTTTGGTGTCTCTAGCAAATTCTCTCAAGACTCTAAAACTTGGATCAGTTTTGTCTACAAATCAAAAAGATGGTACTAATGTACCTACCTTGGTTGTATATGTTGTATGCCCTTTCCCTGGTACTACTGCAGTTTTACAAACTTTAGTTGAGTCTTGTGTTGCTCTTGGATCAGCAGTACATGCTTCTGAAAAAGAAAGTCGTACATTGTTACACTCTCAGATTTCAAAAGATCTAAATTCTGCAGCACCTGCAGATGAAGCGTCAACATCGAATGTTGTGATGCTGTCTGGGTTTAGCATTCCTAACCTGGTTTTGCAAATTGTGAGCTTAGACCTTTTACTGAGAGTAGATATGCCCTGGAAGGAACATTTTGTTTTAAAGGACCTTGCTTTCACCATTTACAACAAAGCACGACGAGTTGTAAGGTCTTCTTCTAACGTTGACGTGATTCAGTCGCAATCTACTCCAGGAAGATCTCAATCCACATTAATGCATGCTAGTTCTTCTTCCCCGGGATTTTGGAAGGATTGTCTTCCTCCACGAATTTCAAATCCAGTAATTGCACGAGAGACCGAACATGACTCTGCAATTAGGCATGGGGTTTGGGACAATTCATGGCAAACATTAAGAACGTCTGGAGGATTGAACTACGATTCAACTAGGTTAATTGAAAAATGGGCTGATAATTTTAGGTGCATGTTTGAACCACTCTTTATTTTAGCAGAACCTGGTTCTGTGGAACAGGTAATCCCTTTGGTTGGCTACAATAATGTATCTTCAGAGTCTTCAAATTCAAGATCCTTAGTTGATGATAGTAGCAGTGGTTATATGCAAACTTCAGCTTCAAGTGGCAACAATACAAGTCCTCTTCTTGATGATACAGACCGTGAGCATAAACTCTACAGTCTTCATTGTTGTTATGGATGGACGGAGGATTGGCGTTGGTTGATTTGCATTTGGACAGATTCCAAAGGGGAGTTACTTGACAGCCAAATATTTCCTTTTGGTGGAATTAGTAGTCGCCAGGACACAAAAGTTCTCCAATGTCTTTTTGTTCAAATTTTGCAGCAAGGATGTCAGATAATTTCTTCTTCCCTTTATTTTGGATCAACTAAGCTCAGGAATATAATCATTACACGTATTGGGTGTTTCTTTGAGCTTGAGTGTCAAGAATGGCAAAGGGCCATTTATTTGGTTGGTGGCAATGAAGTGAAGAAATGGCCAGTACAACTAAGAAGATCTGTGCCTTGTGGTGCCTCTTCCACAAGTAATGGACCTTCACTGCAACAACAAGATATCAGTTTAATACAAGAAAGATCTATGTCTTCTTCTTCCCTGCCTTCTATGTACAACCCTCATCCAAAATCATCTGGCTATATGAAGGGTACTTTAGGTCAATCCAATTATAAGAAAGCTATCTCAGGAAGTCAACCCATGGATTGCTCACGTGGGCTGTCTCAGTTGGTTCAAAGCATCAGTTTGATAGCTGTTTCTGTTGACCATTCATTGCATCTATTTATTCCCACAGATTCCTCTTCATTAGATGGAATAAATCAAAATGGCAACTCAACTACCGGCCATTTGGAAAGTTTCAATTCAGTATCATCATTGGGAGAAATCCCATCGTCCTATATGTTTATTCCCACACCTAGTGTACGTTATCTCCCTCCATCACCCTCACAGCTTCCAACATGTTTAACTTCCGAGTCTCCACCGCTGGCCCATTTACTGCACAGCAAGGGATCTGCTATTCCTCTTTCAACTGGTTATATTGTATCGAAAGCAGTCCCTAGTGCAAGAAAGGGTCGCACGGGAAAAACTAACCAGGAATGGCCATCGATTATCTCAGTGACTCTTATTGACCATTATGGAGGAAACATAGATAATTTCCAAGAAAAGATGGCTCGTGGTGTAAATAGTAGCAGTGGTGTGAAACAAGGTATTAGTAGTAGCGGTAGCGGCAGGATTTCATGTTTGGAATCAAATACGAGAGACTGTGAATTTGAAAAACATTTGGTTCTAGAATCTATATCAGCGGAGCTCCATTCTCTTTCATGGATGACAATCAGTCCAATGTATCCAGAAAGGCGCACTGCCCTACCTTTTCATTGTGATATGCTACTAAGGTTGAGAAGACTTCTGTTTTATGCCGATAAACATCTTGCTCTGCAATCCTTAGATAAGTAG

Protein:   MLYATFIDMIDIDIDDIILTVIVASNGMRGRLTGCCPTDLVKQVYSTNSSNGSTVLGVSSQFPGCQLRGQSCYVEVTLGCLSGSAEKTVQSTSNPYMCITQYCTKSNPAVTDERRAKKPRLSETFPMLEKTLIFPVETVLVPIFYKACAKASLKRIWLRDSSGTSLSVMPSLWNCSDSNFINYCLGFGGSCDISLADSVLGEFIDSHRQRKYNNRNCSNSSSISSTSSTSNNSDVANTSVARELEADADSLSCRQSGLSLNDQLEKDNHKRASKRSWKEIAGSFDQACNVASGSIIDPYTSNRSLVGFQFDSIWDWDQGRCINVDIVDVVAEYGSFDDFFEDDNFDVILGELPGTEESQTAMFSATNGGETSSSPCLGKNDGPEQTPIPFPNLPLIEEHIQDIGPSNNEFMNQNMESTMDTGQSSITGDSSITNKYDYLKRAEAMMTVIPRYSAVETPFSEFSISIFRTPYVPKSKLVEKPSGLSSYVHSTTHPQLISEEKVEMASKAKMITGDYDTISSYSKYYNFVNGRKNYIKKKSITNEMTLHEDDNLSSLSGITFPSSSTSFQEKKTDDTLETGCLLMSLKTVLGTELECGMYQASMRRIRHTLLFCNQVPKSLVMRTSQGLSIQVTGDQSMMPNMISSGNGIKKKDSIPVRIAGDIDSVPDNSVTAPLGVWRVVAPSKSTKASNMLNVESSPFPKNNAVEDFPVFSRRQPLQELLDAISLLVQQSTSFVDVSLDPCDGDGSYDFLTLEEQIRRGFVCGPSSVHAGCGGVLASCHSVDIAGVDLVNPLSTDVRVSSVISLLHSEVRVAMRAAFGNLEGPLSVIEWCNGHNQSGDTINTGDIHYAECNNTELNDSSSEFIGEAISPTFASNISSLRDGVRIDESSQRRSNQEQEHKISGFRNRPTISMLPLPSLLIGFQDDWLKTSPIILNSWEKEQFEPYALPKPLTYCAVCPDIDFLTFASATFLRQIGIVYESCNLGTHSPYLIGSQLDIASKKSSIPGLVLVDCPQTMKKTGMASTSENVLNDYLISSKKNWDLKSFLVSLANSLKTLKLGSVLSTNQKDGTNVPTLVVYVVCPFPGTTAVLQTLVESCVALGSAVHASEKESRTLLHSQISKDLNSAAPADEASTSNVVMLSGFSIPNLVLQIVSLDLLLRVDMPWKEHFVLKDLAFTIYNKARRVVRSSSNVDVIQSQSTPGRSQSTLMHASSSSPGFWKDCLPPRISNPVIARETEHDSAIRHGVWDNSWQTLRTSGGLNYDSTRLIEKWADNFRCMFEPLFILAEPGSVEQVIPLVGYNNVSSESSNSRSLVDDSSSGYMQTSASSGNNTSPLLDDTDREHKLYSLHCCYGWTEDWRWLICIWTDSKGELLDSQIFPFGGISSRQDTKVLQCLFVQILQQGCQIISSSLYFGSTKLRNIIITRIGCFFELECQEWQRAIYLVGGNEVKKWPVQLRRSVPCGASSTSNGPSLQQQDISLIQERSMSSSSLPSMYNPHPKSSGYMKGTLGQSNYKKAISGSQPMDCSRGLSQLVQSISLIAVSVDHSLHLFIPTDSSSLDGINQNGNSTTGHLESFNSVSSLGEIPSSYMFIPTPSVRYLPPSPSQLPTCLTSESPPLAHLLHSKGSAIPLSTGYIVSKAVPSARKGRTGKTNQEWPSIISVTLIDHYGGNIDNFQEKMARGVNSSSGVKQGISSSGSGRISCLESNTRDCEFEKHLVLESISAELHSLSWMTISPMYPERRTALPFHCDMLLRLRRLLFYADKHLALQSLDK